BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B02LP1|AL428664
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1616 1705 0.0
>3x_Contig1616
Length = 10468
Score = 1705 bits (860), Expect = 0.0
Identities = 867/868 (99%), Gaps = 1/868 (0%)
Strand = Plus / Minus
Query: 1 aagtctgttttgacccaacttttcccaggaaactctgatacagagggtattgacactttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1936 aagtctgttttgacccaacttttcccaggaaactctgatacagagggtattgacactttg 1877
Query: 61 aatgcttgttatggtggtacacaatgctcttttcaactctttgaactggattgaatcttc 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1876 aatgcttgttatggtggtac-caatgctcttttcaactctttgaactggattgaatcttc 1818
Query: 121 tgcttgggatggccgtgatgctatcgttgtttgtggtgatattgccatttatgagaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 tgcttgggatggccgtgatgctatcgttgtttgtggtgatattgccatttatgagaaggg 1758
Query: 181 tgctgccagaccaactggtggtgctggtactgtcgctctatggatcggtccagatgctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 tgctgccagaccaactggtggtgctggtactgtcgctctatggatcggtccagatgctcc 1698
Query: 241 aattgtcttcgatccaataagaggttccttcatggaacacgcttatgatttctacaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1697 aattgtcttcgatccaataagaggttccttcatggaacacgcttatgatttctacaagcc 1638
Query: 301 agatttcacaagtgaatacccttacgttgacggtcacttctcattaacttgttacgtcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1637 agatttcacaagtgaatacccttacgttgacggtcacttctcattaacttgttacgtcaa 1578
Query: 361 ggctttggataaggcttacgaggcttactcaaagaaggcaatcgccaagggtctagcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1577 ggctttggataaggcttacgaggcttactcaaagaaggcaatcgccaagggtctagcagc 1518
Query: 421 aaagcctgctggtaactctgccatcaacgtaaccgaacatttcgactacaacgtgttcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 aaagcctgctggtaactctgccatcaacgtaaccgaacatttcgactacaacgtgttcca 1458
Query: 481 tgtcccaacttgtaaattggttaccaagtcttatggtagattgttgtacaatgacttcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 tgtcccaacttgtaaattggttaccaagtcttatggtagattgttgtacaatgacttcag 1398
Query: 541 agccaacccatctctataccctgaaatcgatgcatctttggcttccgtcgaatatgaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 agccaacccatctctataccctgaaatcgatgcatctttggcttccgtcgaatatgaaac 1338
Query: 601 ttctttgaccgacaagaatctggaaaagacattcgtcaatgttgccaaaccattccataa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 ttctttgaccgacaagaatctggaaaagacattcgtcaatgttgccaaaccattccataa 1278
Query: 661 agaaagagtagctccttccttgatcgtcccaactaacactggtaacatgtacactgcttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 agaaagagtagctccttccttgatcgtcccaactaacactggtaacatgtacactgcttc 1218
Query: 721 tgtatatgcttcactttcctccctattgtgctacgtcggttcggatgctctacaaaacaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 tgtatatgcttcactttcctccctattgtgctacgtcggttcggatgctctacaaaacaa 1158
Query: 781 gcgtattggtttgttctcttacggttctggtttggctgcatctttgttctcgtgcaaggt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 gcgtattggtttgttctcttacggttctggtttggctgcatctttgttctcgtgcaaggt 1098
Query: 841 tgtcggtgacatcaaacacatcgtcgat 868
||||||||||||||||||||||||||||
Sbjct: 1097 tgtcggtgacatcaaacacatcgtcgat 1070
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5447
Number of Sequences: 1807
Number of extensions: 5447
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)